ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033088 Triobp 10090 + 15:78947724-79005867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109687 Triobp-005 78983041-79005864 protein_coding
  ENSMUST00000109688 Triobp-201 78983056-79005862 protein_coding
  ENSMUST00000109689 Triobp-002 78947724-79005867 protein_coding
  ENSMUST00000109690 Triobp-001 78947724-79005565 protein_coding
  ENSMUST00000129922 Triobp-008 79002182-79004697 processed_transcript
  ENSMUST00000130663 Triobp-007 78983077-78994859 protein_coding
  ENSMUST00000137934 Triobp-004 78948245-78953255 retained_intron
  ENSMUST00000140228 Triobp-003 78947724-78968842 processed_transcript
  ENSMUST00000144151 Triobp-006 78983705-78991438 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000109687ENSMUST00000109688ENSMUST00000109689ENSMUST00000129922ENSMUST00000140228
Transcript ID C166 Tie2+ EC mES
ENSMUST00000109687 6.616±0.00 N/A 85.447±9.17
ENSMUST00000109688 40.167±4.51 21.872±10.63 N/A
ENSMUST00000109689 N/A N/A 7.197±0.00
ENSMUST00000129922 N/A 30.066±10.16 N/A
ENSMUST00000140228 N/A N/A 13.845±2.18

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00099H CIL_00099H_0002 VISTA
CIL_0008KJ CIL_0008KJ_0002 VISTA
CIL_0008BX CIL_0008BX_0002 VISTA
CIL_0008KA CIL_0008KA_0002 VISTA
CIL_00082J CIL_00082J_0002 VISTA
CIL_0008C1 CIL_0008C1_0002 VISTA
CIL_00082K CIL_00082K_0002 VISTA
CIL_00040B CIL_00040B_0002 CGP
CIL_0001D1 CIL_0001D1_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0007067 IEA mitotic nuclear division
GO:0015629 IEA actin cytoskeleton
GO:0031625 IEA ubiquitin protein ligase binding
GO:0051015 IEA actin filament binding
GO:1900026 IDA positive regulation of substrate adhesion-dependent cell spreading

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006385 triobpb protein_coding Danio_rerio
ENSDARG00000075870 triobpa protein_coding Danio_rerio
ENSG00000100106 TRIOBP TRIO and F-actin binding protein protein_coding Homo_sapiens

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