ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033545 Znrf1 10090 + 8:111536097-111626030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095176 Znrf1-002 111536842-111623778 protein_coding
  ENSMUST00000166859 Znrf1-201 111538343-111626030 protein_coding
  ENSMUST00000168428 Znrf1-202 111536640-111626030 protein_coding
  ENSMUST00000171182 Znrf1-203 111536640-111626030 protein_coding
  ENSMUST00000172856 Znrf1-001 111536097-111625720 protein_coding
  ENSMUST00000173481 Znrf1-009 111538465-111609364 processed_transcript
  ENSMUST00000173506 Znrf1-003 111537120-111622973 protein_coding
  ENSMUST00000173692 Znrf1-006 111561840-111606796 processed_transcript
  ENSMUST00000173726 Znrf1-012 111537463-111621936 protein_coding
  ENSMUST00000173781 Znrf1-010 111541259-111621664 protein_coding
  ENSMUST00000173819 Znrf1-004 111609296-111621775 protein_coding
  ENSMUST00000173922 Znrf1-011 111606748-111622962 nonsense_mediated_decay
  ENSMUST00000174333 Znrf1-008 111538343-111622571 protein_coding
  ENSMUST00000174376 Znrf1-005 111537487-111622501 nonsense_mediated_decay
  ENSMUST00000174454 Znrf1-007 111537578-111622602 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000095176ENSMUST00000172856ENSMUST00000173506
Transcript ID C166 Tie2+ EC mES
ENSMUST00000095176 20.697±2.16 24.863±14.94 10.606±1.55
ENSMUST00000172856 N/A 7.069±0.11 N/A
ENSMUST00000173506 26.666±4.44 35.695±2.37 7.535±0.10

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002PH CIL_0002PH_0002 CGP
CIL_0004Y8 CIL_0004Y8_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISO:IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005829 ISO cytosol
GO:0007010 TAS cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016020 ISO membrane
GO:0016567 ISO protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 IEA synapse
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020475 znrf1 protein_coding Danio_rerio
ENSG00000186187 ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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