ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034032 Rpap1 10090 - 2:119763304-119787537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048493 Rpap1-002 119763960-119787537 protein_coding
  ENSMUST00000099529 Rpap1-001 119763959-119787528 protein_coding
  ENSMUST00000110793 Rpap1-006 119763304-119787504 protein_coding
  ENSMUST00000133146 Rpap1-009 119777857-119780202 retained_intron
  ENSMUST00000136419 Rpap1-005 119763963-119787500 nonsense_mediated_decay
  ENSMUST00000139311 Rpap1-003 119766859-119787519 retained_intron
  ENSMUST00000141800 Rpap1-008 119778188-119787529 processed_transcript
  ENSMUST00000156506 Rpap1-007 119777651-119787514 retained_intron
  ENSMUST00000184294 Rpap1-004 119763966-119787520 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000048493ENSMUST00000099529ENSMUST00000110793ENSMUST00000136419ENSMUST00000139311
Transcript ID C166 Tie2+ EC mES
ENSMUST00000048493 5.563±0.62 1.810±0.51 2.125±0.00
ENSMUST00000099529 2.541±0.82 1.505±0.48 1.235±0.00
ENSMUST00000110793 N/A 1.022±0.00 5.369±0.04
ENSMUST00000136419 1.735±0.08 1.457±0.35 2.561±0.06
ENSMUST00000139311 N/A 0.408±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005IS CIL_0005IS_0003 CGP
CIL_0005F5 CIL_0005F5_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0032774 IEA RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075072 rpap1 protein_coding Danio_rerio
ENSG00000103932 RPAP1 RNA polymerase II associated protein 1 protein_coding Homo_sapiens

Loading