ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RNA polymerase II associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103932 RPAP1 9606 - 15:41517176-41544269 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304330 RPAP1-001 41517176-41544259 protein_coding
  ENST00000561603 RPAP1-004 41517176-41544257 protein_coding
  ENST00000561631 RPAP1-013 41523948-41525207 retained_intron
  ENST00000562303 RPAP1-005 41517179-41544245 nonsense_mediated_decay
  ENST00000563293 RPAP1-011 41534805-41536375 retained_intron
  ENST00000564934 RPAP1-014 41522506-41523844 retained_intron
  ENST00000565035 RPAP1-012 41523779-41526970 protein_coding
  ENST00000565167 RPAP1-006 41517176-41521791 retained_intron
  ENST00000566863 RPAP1-008 41536163-41544269 protein_coding
  ENST00000567866 RPAP1-010 41535512-41544250 protein_coding
  ENST00000568413 RPAP1-015 41527988-41533394 processed_transcript
  ENST00000569829 RPAP1-009 41536653-41544266 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000304330ENST00000561603ENST00000562303ENST00000565167ENST00000569829
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000304330 N/A 5.641±2.61 N/A 6.512±0.00 6.550±5.33
ENST00000561603 1.140±0.00 4.264±3.04 0.783±0.00 N/A 3.334±0.51
ENST00000562303 0.723±0.00 N/A N/A N/A 0.393±0.25
ENST00000565167 10.190±1.09 6.526±2.21 9.071±0.00 N/A 4.802±0.66
ENST00000569829 N/A N/A N/A N/A 5.784±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005IS CIL_0005IS_0002 CGP
CIL_0005F5 CIL_0005F5_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0032774 IEA RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075072 rpap1 protein_coding Danio_rerio
ENSMUSG00000034032 Rpap1 protein_coding Mus_musculus

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