ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036661 Dennd3 10090 + 15:73512560-73572242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043414 Dennd3-001 73512560-73572242 protein_coding
  ENSMUST00000159322 Dennd3-006 73564862-73567077 retained_intron
  ENSMUST00000160267 Dennd3-003 73557636-73568107 nonsense_mediated_decay
  ENSMUST00000160727 Dennd3-007 73567078-73570899 retained_intron
  ENSMUST00000162488 Dennd3-002 73522342-73570954 protein_coding
  ENSMUST00000162824 Dennd3-005 73518614-73523545 processed_transcript
  ENSMUST00000173292 Dennd3-008 73512672-73572099 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000043414ENSMUST00000173292
Transcript ID C166 Tie2+ EC mES
ENSMUST00000043414 1.568±0.56 17.867±10.12 0.078±0.01
ENSMUST00000173292 0.500±0.21 N/A 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006FQ CIL_0006FQ_0003 CGP
CIL_0007WG CIL_0007WG_0002 VISTA
CIL_0000X9 CIL_0000X9_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008333 IGI endosome to lysosome transport
GO:0017112 IGI Rab guanyl-nucleotide exchange factor activity
GO:0032851 IGI positive regulation of Rab GTPase activity
GO:0044257 IMP cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013153 dennd3b protein_coding Danio_rerio
ENSDARG00000078797 dennd3a protein_coding Danio_rerio
ENSG00000105339 DENND3 DENN/MADD domain containing 3 protein_coding Homo_sapiens

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