ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037926 Ssh2 10090 + 11:77216287-77460220 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037912 Ssh2-001 77216287-77460220 protein_coding
  ENSMUST00000127890 Ssh2-004 77348280-77413635 processed_transcript
  ENSMUST00000156488 Ssh2-003 77216287-77393153 protein_coding
  ENSMUST00000180394 Ssh2-005 77346743-77350188 retained_intron
  ENSMUST00000180545 Ssh2-006 77391437-77394003 retained_intron
  ENSMUST00000180554 Ssh2-007 77348288-77432157 retained_intron
  ENSMUST00000181283 Ssh2-002 77348282-77455521 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000037912ENSMUST00000181283
Transcript ID C166 Tie2+ EC mES
ENSMUST00000037912 3.029±0.65 6.050±2.74 1.147±0.17
ENSMUST00000181283 1.136±0.11 4.143±0.19 1.089±0.32

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000873 CIL_000873_0002 VISTA
CIL_0009BZ CIL_0009BZ_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003779 IBA actin binding
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IBA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 IBA protein dephosphorylation
GO:0008064 IBA regulation of actin polymerization or depolymerization
GO:0008138 IBA protein tyrosine/serine/threonine phosphatase activity
GO:0010591 IBA regulation of lamellipodium assembly
GO:0030054 IEA cell junction
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0050770 IBA regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088440 ssh2a protein_coding Danio_rerio
ENSG00000141298 SSH2 slingshot protein phosphatase 2 protein_coding Homo_sapiens

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