ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038116 Phf20 10090 + 2:156196466-156309952 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037401 Phf20-001 156196642-156309952 protein_coding
  ENSMUST00000122814 Phf20-009 156296405-156304692 processed_transcript
  ENSMUST00000131479 Phf20-006 156263185-156272624 processed_transcript
  ENSMUST00000132129 Phf20-002 156196756-156254514 retained_intron
  ENSMUST00000132352 Phf20-007 156293745-156298599 retained_intron
  ENSMUST00000135796 Phf20-003 156196754-156223992 retained_intron
  ENSMUST00000145731 Phf20-010 156196466-156254310 protein_coding
  ENSMUST00000147234 Phf20-011 156282631-156292528 processed_transcript
  ENSMUST00000147242 Phf20-008 156296029-156298691 processed_transcript
  ENSMUST00000152617 Phf20-004 156196734-156309949 processed_transcript
  ENSMUST00000153822 Phf20-005 156222880-156251810 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000037401ENSMUST00000122814ENSMUST00000152617
Transcript ID C166 Tie2+ EC mES
ENSMUST00000037401 11.711±0.70 4.008±2.12 3.361±1.58
ENSMUST00000122814 N/A 10.175±0.00 N/A
ENSMUST00000152617 N/A 0.825±0.00 1.096±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000X2 CIL_0000X2_0002 CGP
CIL_00056T CIL_00056T_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000123 ISS histone acetyltransferase complex
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0031965 IEA nuclear membrane
GO:0043981 ISS histone H4-K5 acetylation
GO:0043982 ISS histone H4-K8 acetylation
GO:0043984 ISS histone H4-K16 acetylation
GO:0043995 ISS histone acetyltransferase activity (H4-K5 specific)
GO:0043996 ISS histone acetyltransferase activity (H4-K8 specific)
GO:0046972 ISS histone acetyltransferase activity (H4-K16 specific)
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002750 phf20a protein_coding Danio_rerio
ENSDARG00000038737 phf20b protein_coding Danio_rerio
ENSG00000025293 PHF20 PHD finger protein 20 protein_coding Homo_sapiens

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