ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038236 Hoxa7 10090 - 6:52214491-52221854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048715 Hoxa7-201 52215623-52218573 protein_coding
  ENSMUST00000134367 Hoxa7-004 52215753-52218711 protein_coding
  ENSMUST00000140316 Hoxa7-003 52216440-52217452 protein_coding
  ENSMUST00000150041 Hoxa7-001 52216009-52221854 protein_coding
  ENSMUST00000153280 Hoxa7-002 52214491-52220393 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000153280
Transcript ID C166 Tie2+ EC mES
ENSMUST00000153280 12.091±2.67 14.749±0.26 0.284±0.06

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007OD CIL_0007OD_0003 UCNEbase
CIL_0008QL CIL_0008QL_0002 VISTA
CIL_000911 CIL_000911_0002 VISTA
CIL_000811 CIL_000811_0002 VISTA
CIL_00097P CIL_00097P_0002 VISTA
CIL_0003P9 CIL_0003P9_0002 CGP
CIL_0003PA CIL_0003PA_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001525 IEA angiogenesis
GO:0001953 IEA negative regulation of cell-matrix adhesion
GO:0002686 IEA negative regulation of leukocyte migration
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0009952 IGI anterior/posterior pattern specification
GO:0043565 IEA sequence-specific DNA binding
GO:0045617 IEA negative regulation of keratinocyte differentiation
GO:0045656 IEA negative regulation of monocyte differentiation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048704 IGI embryonic skeletal system morphogenesis
GO:0048863 IDA stem cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056030 hoxb7a protein_coding Danio_rerio
ENSG00000122592 HOXA7 homeobox A7 protein_coding Homo_sapiens

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