ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038384 Setd1b 10090 + 5:123142193-123168629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056053 Setd1b-201 123142957-123167410 protein_coding
  ENSMUST00000100731 Setd1b-004 123142193-123149981 retained_intron
  ENSMUST00000162839 Setd1b-003 123163381-123164107 protein_coding
  ENSMUST00000163030 Setd1b-001 123142193-123168629 protein_coding
  ENSMUST00000173221 Setd1b-005 123162709-123165162 retained_intron
  ENSMUST00000174836 Setd1b-002 123142193-123167410 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000056053ENSMUST00000163030ENSMUST00000173221
Transcript ID C166 Tie2+ EC mES
ENSMUST00000056053 2.252±0.30 N/A N/A
ENSMUST00000163030 2.990±0.57 2.421±1.63 2.965±1.69
ENSMUST00000173221 N/A N/A 4.472±0.71

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00006S CIL_00006S_0003 CGP
CIL_0002ZI CIL_0002ZI_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035097 IEA histone methyltransferase complex
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0048188 ISS Set1C/COMPASS complex
GO:0051568 IEA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060847 setd1ba protein_coding Danio_rerio
ENSG00000139718 SETD1B SET domain containing 1B protein_coding Homo_sapiens

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