ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038564 Ift172 10090 - 5:31253277-31291116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041565 Ift172-001 31253277-31291107 protein_coding
  ENSMUST00000200936 Ift172-002 31262830-31263629 retained_intron
  ENSMUST00000201057 Ift172-003 31260479-31261244 retained_intron
  ENSMUST00000201274 Ift172-005 31275508-31291039 retained_intron
  ENSMUST00000201426 Ift172-006 31253280-31254653 retained_intron
  ENSMUST00000201809 Ift172-010 31286105-31291116 protein_coding
  ENSMUST00000201953 Ift172-012 31261353-31263921 retained_intron
  ENSMUST00000202410 Ift172-009 31285465-31286577 retained_intron
  ENSMUST00000202560 Ift172-011 31253553-31254810 retained_intron
  ENSMUST00000202585 Ift172-004 31266339-31280419 protein_coding
  ENSMUST00000202589 Ift172-008 31271643-31281440 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041565ENSMUST00000201274ENSMUST00000201426
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041565 4.775±0.72 3.031±0.87 3.674±1.13
ENSMUST00000201274 N/A 2.323±0.00 N/A
ENSMUST00000201426 N/A N/A 27.774±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001DG CIL_0001DG_0002 CGP
CIL_00010D CIL_00010D_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001841 IMP neural tube formation
GO:0001843 IMP neural tube closure
GO:0001947 IMP heart looping
GO:0005515 IPI protein binding
GO:0005929 IDA cilium
GO:0005930 IBA axoneme
GO:0007219 IMP Notch signaling pathway
GO:0007224 IMP smoothened signaling pathway
GO:0007368 IMP determination of left/right symmetry
GO:0007420 IMP brain development
GO:0007507 IMP heart development
GO:0008544 IMP epidermis development
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0009953 IMP dorsal/ventral pattern formation
GO:0016485 IMP protein processing
GO:0021522 IMP spinal cord motor neuron differentiation
GO:0021915 IMP neural tube development
GO:0030992 IDA intraciliary transport particle B
GO:0031122 IMP cytoplasmic microtubule organization
GO:0031514 ISO motile cilium
GO:0031982 IEA vesicle
GO:0036064 IBA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0050680 IMP negative regulation of epithelial cell proliferation
GO:0060021 IMP palate development
GO:0060173 IMP limb development
GO:0060271 IMP cilium morphogenesis
GO:0060348 IMP bone development
GO:0061525 IMP hindgut development
GO:0070986 IMP left/right axis specification
GO:0097225 IDA sperm midpiece
GO:0097228 IDA sperm principal piece
GO:0097598 IDA sperm cytoplasmic droplet

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041870 ift172 protein_coding Danio_rerio
ENSG00000138002 IFT172 intraflagellar transport 172 protein_coding Homo_sapiens

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