ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041565 Ift172-001 ENSMUSG00000038564 10090 - 5:31253277-31291107 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041565
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041565 4.775±0.72 3.031±0.87 3.674±1.13

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001841 IMP neural tube formation
GO:0001843 IMP neural tube closure
GO:0001947 IMP heart looping
GO:0005515 IPI protein binding
GO:0005929 IDA cilium
GO:0005930 IBA axoneme
GO:0007219 IMP Notch signaling pathway
GO:0007224 IMP smoothened signaling pathway
GO:0007368 IMP determination of left/right symmetry
GO:0007420 IMP brain development
GO:0007507 IMP heart development
GO:0008544 IMP epidermis development
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0009953 IMP dorsal/ventral pattern formation
GO:0016485 IMP protein processing
GO:0021522 IMP spinal cord motor neuron differentiation
GO:0021915 IMP neural tube development
GO:0030992 IDA intraciliary transport particle B
GO:0031122 IMP cytoplasmic microtubule organization
GO:0031514 ISO motile cilium
GO:0031982 IEA vesicle
GO:0036064 IBA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0050680 IMP negative regulation of epithelial cell proliferation
GO:0060021 IMP palate development
GO:0060173 IMP limb development
GO:0060271 IMP cilium morphogenesis
GO:0060348 IMP bone development
GO:0061525 IMP hindgut development
GO:0070986 IMP left/right axis specification
GO:0097225 IDA sperm midpiece
GO:0097228 IDA sperm principal piece
GO:0097598 IDA sperm cytoplasmic droplet

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260570 IFT172-001 protein_coding Homo_sapiens 0 6698
ENST00000359466 IFT172-004 protein_coding Homo_sapiens 0 2097
ENST00000416524 IFT172-005 protein_coding Homo_sapiens 0 1958
ENST00000420854 IFT172-016 nonsense_mediated_decay Homo_sapiens 0 627
ENST00000443889 IFT172-012 protein_coding Homo_sapiens 0 658
ENST00000450564 IFT172-010 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000463613 IFT172-007 retained_intron Homo_sapiens 0 231
ENST00000475476 IFT172-006 retained_intron Homo_sapiens 0 586
ENST00000476264 IFT172-002 retained_intron Homo_sapiens 0 869
ENST00000489492 IFT172-008 retained_intron Homo_sapiens 0 283
ENST00000494163 IFT172-014 retained_intron Homo_sapiens 0 483
ENST00000507184 IFT172-017 retained_intron Homo_sapiens 0 3738
ENST00000509128 IFT172-019 nonsense_mediated_decay Homo_sapiens 0 1940
ENST00000511842 IFT172-018 retained_intron Homo_sapiens 0 2261

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