ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038644 Pold1 10090 - 7:44532746-44548849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049343 Pold1-001 44532746-44548847 protein_coding
  ENSMUST00000123787 Pold1-009 44534069-44535091 retained_intron
  ENSMUST00000131302 Pold1-005 44541497-44542342 retained_intron
  ENSMUST00000132268 Pold1-006 44537519-44538418 retained_intron
  ENSMUST00000136225 Pold1-011 44532754-44534186 retained_intron
  ENSMUST00000138746 Pold1-002 44532751-44548849 retained_intron
  ENSMUST00000141742 Pold1-008 44533896-44535396 retained_intron
  ENSMUST00000142483 Pold1-007 44535016-44535958 retained_intron
  ENSMUST00000145956 Pold1-004 44542102-44548733 protein_coding
  ENSMUST00000147503 Pold1-010 44533280-44534189 retained_intron
  ENSMUST00000151793 Pold1-003 44532786-44548838 nonsense_mediated_decay
  ENSMUST00000154783 Pold1-012 44532749-44533918 retained_intron

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000049343ENSMUST00000136225ENSMUST00000151793ENSMUST00000154783
Transcript ID C166 Tie2+ EC mES
ENSMUST00000049343 16.407±1.89 2.236±1.29 13.028±3.77
ENSMUST00000136225 N/A 2.999±2.12 N/A
ENSMUST00000151793 N/A 0.952±0.00 N/A
ENSMUST00000154783 N/A 12.316±0.00 106.184±16.84

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000109 IEA nucleotide-excision repair complex
GO:0000166 IEA nucleotide binding
GO:0000731 IEA DNA synthesis involved in DNA repair
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0006287 IMP base-excision repair, gap-filling
GO:0006297 IBA nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0008408 IMP 3'-5' exonuclease activity
GO:0016020 IEA membrane
GO:0016235 IEA aggresome
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0045004 IMP DNA replication proofreading
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055089 ISS fatty acid homeostasis
GO:0071897 IEA DNA biosynthetic process
GO:0090305 IMP:IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027689 pold1 protein_coding Danio_rerio
ENSG00000062822 POLD1 polymerase (DNA directed), delta 1, catalytic subunit protein_coding Homo_sapiens

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