ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040752 Myh6 10090 - 14:54941981-54966927 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081857 Myh6-001 54941981-54966641 protein_coding
  ENSMUST00000111456 Myh6-002 54965270-54966927 protein_coding
  ENSMUST00000124930 Myh6-004 54963958-54966574 protein_coding
  ENSMUST00000131892 Myh6-005 54957072-54957907 retained_intron
  ENSMUST00000134256 Myh6-003 54963958-54966605 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000081857ENSMUST00000131892
Transcript ID C166 Tie2+ EC mES
ENSMUST00000081857 0.007±0.00 0.019±0.01 0.043±0.02
ENSMUST00000131892 N/A N/A 0.353±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00090C CIL_00090C_0002 VISTA
CIL_0009BW CIL_0009BW_0002 VISTA
CIL_0008Q4 CIL_0008Q4_0002 VISTA
CIL_0008QH CIL_0008QH_0002 VISTA
CIL_00051L CIL_00051L_0002 CGP
CIL_0004Z7 CIL_0004Z7_0008 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IMP microfilament motor activity
GO:0001701 IMP in utero embryonic development
GO:0001725 IDA stress fiber
GO:0002026 IMP regulation of the force of heart contraction
GO:0002027 IMP regulation of heart rate
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006200 IEA ATP catabolic process
GO:0006936 IEA muscle contraction
GO:0006941 IMP striated muscle contraction
GO:0007512 IMP adult heart development
GO:0007522 IMP visceral muscle development
GO:0008016 IMP regulation of heart contraction
GO:0008217 IMP regulation of blood pressure
GO:0016459 IDA myosin complex
GO:0016887 IEA ATPase activity
GO:0019901 IEA protein kinase binding
GO:0030016 IDA myofibril
GO:0030018 IDA Z disc
GO:0030048 IMP actin filament-based movement
GO:0030049 IEA muscle filament sliding
GO:0030239 IMP myofibril assembly
GO:0030509 IDA BMP signaling pathway
GO:0030898 IEA actin-dependent ATPase activity
GO:0032982 IEA myosin filament
GO:0043462 IMP regulation of ATPase activity
GO:0045214 IMP sarcomere organization
GO:0048739 IMP cardiac muscle fiber development
GO:0051015 IEA actin filament binding
GO:0055009 IEA atrial cardiac muscle tissue morphogenesis
GO:0055010 IEA ventricular cardiac muscle tissue morphogenesis
GO:0060070 IDA canonical Wnt signaling pathway
GO:0060420 IDA regulation of heart growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079564 vmhc protein_coding Danio_rerio
ENSDARG00000079782 vmhcl protein_coding Danio_rerio
ENSG00000197616 MYH6 myosin, heavy chain 6, cardiac muscle, alpha protein_coding Homo_sapiens

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