ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041777 Cir1 10090 - 2:73283105-73312701 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058615 Cir1-001 73283105-73312701 protein_coding
  ENSMUST00000136519 Cir1-002 73305919-73312566 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000058615
Transcript ID C166 Tie2+ EC mES
ENSMUST00000058615 9.784±0.93 7.018±1.24 5.258±0.23

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007OE CIL_0007OE_0002 UCNEbase
CIL_0008JW CIL_0008JW_0002 VISTA
CIL_0008K1 CIL_0008K1_0002 VISTA
CIL_0008S8 CIL_0008S8_0002 VISTA
CIL_00096H CIL_00096H_0002 VISTA
CIL_0008GI CIL_0008GI_0002 VISTA
CIL_0008K2 CIL_0008K2_0002 VISTA
CIL_0004JE CIL_0004JE_0002 CGP
CIL_0001HA CIL_0001HA_0002 CGP
CIL_0003IH CIL_0003IH_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000118 IEA histone deacetylase complex
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0016607 ISA nuclear speck
GO:0045892 ISA negative regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000138433 CIR1 corepressor interacting with RBPJ, 1 protein_coding Homo_sapiens

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