ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042185 Nfrkb 10090 + 9:31386192-31421333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086167 Nfrkb-001 31386192-31421333 protein_coding
  ENSMUST00000128375 Nfrkb-006 31399219-31421333 retained_intron
  ENSMUST00000131540 Nfrkb-004 31386204-31394745 nonsense_mediated_decay
  ENSMUST00000132329 Nfrkb-002 31386197-31421333 nonsense_mediated_decay
  ENSMUST00000134528 Nfrkb-005 31392788-31399198 retained_intron
  ENSMUST00000143558 Nfrkb-008 31409427-31410472 retained_intron
  ENSMUST00000150179 Nfrkb-007 31397232-31399170 retained_intron
  ENSMUST00000152593 Nfrkb-003 31386213-31421333 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000086167ENSMUST00000128375ENSMUST00000132329ENSMUST00000134528
Transcript ID C166 Tie2+ EC mES
ENSMUST00000086167 4.543±0.33 5.143±0.94 1.410±0.34
ENSMUST00000128375 N/A 2.101±0.00 N/A
ENSMUST00000132329 1.716±0.35 1.275±0.30 0.624±0.01
ENSMUST00000134528 N/A 1.645±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091512 nfrkb protein_coding Danio_rerio
ENSG00000170322 NFRKB nuclear factor related to kappaB binding protein protein_coding Homo_sapiens

Loading