ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086167 Nfrkb-001 ENSMUSG00000042185 10090 + 9:31386192-31421333 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000086167
Transcript ID C166 Tie2+ EC mES
ENSMUST00000086167 4.543±0.33 5.143±0.94 1.410±0.34

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA Ino80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000446488 NFRKB-001 protein_coding Homo_sapiens 0 4750
ENST00000524746 NFRKB-003 protein_coding Homo_sapiens 0 4741
ENST00000524794 NFRKB-002 protein_coding Homo_sapiens 0 4028
ENST00000530278 NFRKB-008 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000531755 NFRKB-004 protein_coding Homo_sapiens 0 2846
ENST00000532147 NFRKB-011 retained_intron Homo_sapiens 0 281

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