ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043279 Trim56 10090 - 5:137105644-137116209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054384 Trim56-001 137105644-137116207 protein_coding
  ENSMUST00000152207 Trim56-002 137114024-137116209 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000054384
Transcript ID C166 Tie2+ EC mES
ENSMUST00000054384 2.141±0.59 3.334±0.67 0.392±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0032608 IMP interferon-beta production
GO:0034340 IDA response to type I interferon
GO:0044822 IEA poly(A) RNA binding
GO:0045087 IDA innate immune response
GO:0046597 IDA negative regulation of viral entry into host cell
GO:0051607 IMP defense response to virus
GO:0070534 IDA protein K63-linked ubiquitination
GO:1902187 IDA negative regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000169871 TRIM56 tripartite motif containing 56 protein_coding Homo_sapiens

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