ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049550 Clip1 10090 - 5:123577795-123684618 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031382 Clip1-008 123579244-123656018 protein_coding
  ENSMUST00000063905 Clip1-003 123578833-123684325 protein_coding
  ENSMUST00000111561 Clip1-005 123577807-123684275 protein_coding
  ENSMUST00000111564 Clip1-002 123577795-123684322 protein_coding
  ENSMUST00000111566 Clip1-001 123577795-123684618 protein_coding
  ENSMUST00000125340 Clip1-010 123577818-123603810 retained_intron
  ENSMUST00000133545 Clip1-013 123586187-123617463 retained_intron
  ENSMUST00000137363 Clip1-007 123577807-123647877 protein_coding
  ENSMUST00000137602 Clip1-009 123579074-123612172 retained_intron
  ENSMUST00000144121 Clip1-006 123617657-123655908 nonsense_mediated_decay
  ENSMUST00000149410 Clip1-004 123617706-123666690 protein_coding
  ENSMUST00000154432 Clip1-012 123590069-123603719 retained_intron
  ENSMUST00000154672 Clip1-011 123579451-123617822 protein_coding
  ENSMUST00000198833 Clip1-015 123577867-123578557 processed_transcript
  ENSMUST00000199018 Clip1-014 123633583-123636274 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031382ENSMUST00000111561ENSMUST00000111564ENSMUST00000111566ENSMUST00000154672
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031382 4.507±1.03 6.315±0.24 N/A
ENSMUST00000111561 N/A 5.327±0.00 N/A
ENSMUST00000111564 11.999±1.47 6.247±0.81 2.782±0.51
ENSMUST00000111566 4.724±0.22 5.943±1.08 4.470±1.54
ENSMUST00000154672 8.040±0.85 4.161±0.00 3.644±0.48

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002ZE CIL_0002ZE_0002 CGP
CIL_0002ZD CIL_0002ZD_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001578 ISS microtubule bundle formation
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005874 IDA microtubule
GO:0005881 IDA cytoplasmic microtubule
GO:0008017 IDA microtubule binding
GO:0008270 IEA zinc ion binding
GO:0015630 ISS microtubule cytoskeleton
GO:0015631 ISS tubulin binding
GO:0016020 IEA membrane
GO:0031116 ISS positive regulation of microtubule polymerization
GO:0031410 IEA cytoplasmic vesicle
GO:0035371 IDA microtubule plus-end
GO:0042995 IEA cell projection
GO:0044354 ISS macropinosome
GO:0044861 IMP protein transport into plasma membrane raft
GO:0051010 IDA microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130779 CLIP1 CAP-GLY domain containing linker protein 1 protein_coding Homo_sapiens

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