ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054808 Actn4 10090 - 7:28893248-28962340 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068045 Actn4-001 28893248-28962340 protein_coding
  ENSMUST00000127210 Actn4-005 28898620-28962223 protein_coding
  ENSMUST00000129338 Actn4-008 28894232-28894852 retained_intron
  ENSMUST00000140622 Actn4-004 28907014-28919221 protein_coding
  ENSMUST00000143584 Actn4-007 28895642-28897031 retained_intron
  ENSMUST00000144909 Actn4-002 28893653-28907385 processed_transcript
  ENSMUST00000148196 Actn4-003 28913378-28949759 protein_coding
  ENSMUST00000150493 Actn4-006 28901915-28907686 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000068045ENSMUST00000144909
Transcript ID C166 Tie2+ EC mES
ENSMUST00000068045 88.633±14.35 103.387±70.63 25.560±2.51
ENSMUST00000144909 27.338±6.09 N/A N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0001725 IDA stress fiber
GO:0001882 IEA nucleoside binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005911 IDA cell-cell junction
GO:0005925 IEA focal adhesion
GO:0015031 IEA protein transport
GO:0030018 IDA Z disc
GO:0030529 ISS ribonucleoprotein complex
GO:0030863 IDA cortical cytoskeleton
GO:0031143 IDA pseudopodium
GO:0032403 IEA protein complex binding
GO:0042803 TAS protein homodimerization activity
GO:0042981 IEA regulation of apoptotic process
GO:0043005 IEA neuron projection
GO:0043234 IEA protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0047485 IEA protein N-terminus binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048549 IMP positive regulation of pinocytosis
GO:0051015 IDA actin filament binding
GO:0051017 IDA actin filament bundle assembly
GO:0051271 IDA negative regulation of cellular component movement
GO:0051272 IDA positive regulation of cellular component movement
GO:0070062 IEA extracellular vesicular exosome
GO:0070830 IEA:IMP tight junction assembly
GO:1902396 IEA:IMP protein localization to tight junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130402 ACTN4 actinin, alpha 4 protein_coding Homo_sapiens

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