ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058440 Nrf1 10090 + 6:30047988-30153458 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004761 Nrf1-201 30089895-30129392 protein_coding
  ENSMUST00000069808 Nrf1-202 30089889-30144855 protein_coding
  ENSMUST00000069831 Nrf1-203 30089895-30129392 protein_coding
  ENSMUST00000115199 Nrf1-010 30076321-30129760 protein_coding
  ENSMUST00000115200 Nrf1-015 30048072-30130116 protein_coding
  ENSMUST00000115204 Nrf1-007 30048072-30145197 protein_coding
  ENSMUST00000115206 Nrf1-004 30048031-30144860 protein_coding
  ENSMUST00000115208 Nrf1-005 30048045-30152523 protein_coding
  ENSMUST00000115209 Nrf1-006 30048067-30152518 protein_coding
  ENSMUST00000115211 Nrf1-002 30048002-30153180 protein_coding
  ENSMUST00000115212 Nrf1-001 30047988-30153458 protein_coding
  ENSMUST00000123194 Nrf1-008 30047991-30098575 protein_coding
  ENSMUST00000130096 Nrf1-012 30089934-30090998 retained_intron
  ENSMUST00000132866 Nrf1-014 30116115-30140904 protein_coding
  ENSMUST00000133837 Nrf1-013 30097783-30116126 processed_transcript
  ENSMUST00000133928 Nrf1-016 30048042-30095346 protein_coding
  ENSMUST00000146988 Nrf1-003 30048029-30098908 retained_intron
  ENSMUST00000148990 Nrf1-009 30048151-30090038 protein_coding
  ENSMUST00000167972 Nrf1-204 30089895-30151677 protein_coding
  ENSMUST00000170535 Nrf1-205 30089895-30144855 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000115206ENSMUST00000115211ENSMUST00000115212ENSMUST00000167972
Transcript ID C166 Tie2+ EC mES
ENSMUST00000115206 4.520±0.77 3.371±0.00 N/A
ENSMUST00000115211 4.963±0.59 3.017±0.64 N/A
ENSMUST00000115212 3.095±0.92 3.242±0.79 4.559±0.22
ENSMUST00000167972 7.593±1.48 4.133±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001YF CIL_0001YF_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001666 IEA response to hypoxia
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0007005 IMP mitochondrion organization
GO:0031100 IEA organ regeneration
GO:0032355 IEA response to estradiol
GO:0032496 IEA response to lipopolysaccharide
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0051593 IEA response to folic acid
GO:0051602 IEA response to electrical stimulus
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000018 nrf1 protein_coding Danio_rerio
ENSG00000106459 NRF1 nuclear respiratory factor 1 protein_coding Homo_sapiens

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