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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066392 Nrxn3 10090 + 12:88722876-90334935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057634 Nrxn3-002 88953399-90333060 protein_coding
  ENSMUST00000110130 Nrxn3-006 89812483-90333443 protein_coding
  ENSMUST00000110133 Nrxn3-010 89812483-90332899 protein_coding
  ENSMUST00000110138 Nrxn3-005 88722888-88850849 retained_intron
  ENSMUST00000163134 Nrxn3-001 88794504-90334935 protein_coding
  ENSMUST00000163944 Nrxn3-007 88725009-88795115 processed_transcript
  ENSMUST00000164072 Nrxn3-008 88795439-88853243 processed_transcript
  ENSMUST00000167103 Nrxn3-003 88723109-90332897 nonsense_mediated_decay
  ENSMUST00000167734 Nrxn3-004 88722876-89261571 retained_intron
  ENSMUST00000167887 Nrxn3-201 89193106-90332410 protein_coding
  ENSMUST00000170533 Nrxn3-009 88953390-89187319 processed_transcript
  ENSMUST00000190030 Nrxn3-013 88725681-88794981 processed_transcript
  ENSMUST00000190626 Nrxn3-012 88722986-90332878 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000057634ENSMUST00000110138ENSMUST00000163134ENSMUST00000163944ENSMUST00000167103ENSMUST00000167887ENSMUST00000170533ENSMUST00000190030ENSMUST00000190626
Transcript ID Tie2+ EC mES
ENSMUST00000057634 0.023±0.00 N/A
ENSMUST00000110138 0.013±0.00 0.158±0.14
ENSMUST00000163134 0.087±0.00 0.014±0.00
ENSMUST00000163944 0.137±0.00 N/A
ENSMUST00000167103 0.021±0.00 N/A
ENSMUST00000167887 0.170±0.16 0.206±0.00
ENSMUST00000170533 N/A 0.120±0.00
ENSMUST00000190030 N/A 0.099±0.00
ENSMUST00000190626 N/A 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004U1 CIL_0004U1_0002 CGP
CIL_0008FT CIL_0008FT_0002 VISTA
CIL_0004U0 CIL_0004U0_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005246 IGI calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0007155 IEA cell adhesion
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0007612 IEA learning
GO:0016021 IEA integral component of membrane
GO:0030534 IEA adult behavior
GO:0035176 IEA social behavior
GO:0042734 ISA presynaptic membrane
GO:0046872 IEA metal ion binding
GO:0051965 IEA positive regulation of synapse assembly
GO:0071625 IEA vocalization behavior
GO:0090129 IEA positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043746 nrxn3a protein_coding Danio_rerio
ENSDARG00000062693 nrxn3b protein_coding Danio_rerio
ENSG00000021645 NRXN3 neurexin 3 protein_coding Homo_sapiens

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