ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167887 Nrxn3-201 ENSMUSG00000066392 10090 + 12:89193106-90332410 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000167887
Transcript ID Tie2+ EC mES
ENSMUST00000167887 0.170±0.16 0.206±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IGI calcium channel regulator activity
GO:0005515 IPI protein binding
GO:0007155 IEA cell adhesion
GO:0007268 IGI synaptic transmission
GO:0007269 IGI neurotransmitter secretion
GO:0007416 IGI synapse assembly
GO:0016021 IEA integral component of membrane
GO:0042734 ISA presynaptic membrane
GO:0046872 IEA metal ion binding
GO:0051965 IEA positive regulation of synapse assembly
GO:0090129 IEA positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088179 nrxn3a-202 protein_coding Danio_rerio 0 1561
ENSDART00000156928 nrxn3a-001 protein_coding Danio_rerio 0 1489
ENSDART00000090934 nrxn3b-202 protein_coding Danio_rerio 0 1162
ENSDART00000127050 nrxn3b-203 protein_coding Danio_rerio 0 1162
ENSDART00000090646 nrxn3b-201 protein_coding Danio_rerio 0 1155
ENSDART00000149694 nrxn3b-001 protein_coding Danio_rerio 0 556
ENSDART00000064241 nrxn3a-201 protein_coding Danio_rerio 0 302
ENSDART00000153697 nrxn3a-003 protein_coding Danio_rerio 0 302
ENSDART00000154519 nrxn3a-002 nonsense_mediated_decay Danio_rerio 0 302
ENSDART00000087657 nrxn2a-201 protein_coding Danio_rerio 0 267
ENSDART00000141629 nrxn2a-001 protein_coding Danio_rerio 0 267
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 0 636
ENST00000281127 NRXN3-005 protein_coding Homo_sapiens 0 990
ENST00000335750 NRXN3-201 protein_coding Homo_sapiens 0 2673
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 0 636
ENST00000377559 NRXN2-002 protein_coding Homo_sapiens 0 531
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 0 636
ENST00000428277 NRXN3-006 protein_coding Homo_sapiens 0 1605
ENST00000486057 NRXN2-009 processed_transcript Homo_sapiens 0 230
ENST00000553631 NRXN3-009 protein_coding Homo_sapiens 0 411
ENST00000554719 NRXN3-001 protein_coding Homo_sapiens 0 3121
ENST00000554738 NRXN3-002 nonsense_mediated_decay Homo_sapiens 0 3609
ENST00000555073 NRXN3-012 processed_transcript Homo_sapiens 0 374
ENST00000555387 NRXN3-007 nonsense_mediated_decay Homo_sapiens 0 1114
ENST00000556003 NRXN3-013 processed_transcript Homo_sapiens 0 494
ENST00000556496 NRXN3-003 retained_intron Homo_sapiens 0 2503
ENST00000557081 NRXN3-011 protein_coding Homo_sapiens 0 608
ENST00000557594 NRXN3-004 protein_coding Homo_sapiens 0 536

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