ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069729 Arid1b 10090 + 17:4994332-5347656 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092723 Arid1b-002 4994939-5343505 protein_coding
  ENSMUST00000115797 Arid1b-201 4995074-5347656 protein_coding
  ENSMUST00000115799 Arid1b-001 4996421-5347656 protein_coding
  ENSMUST00000124362 Arid1b-005 4994332-5097733 processed_transcript
  ENSMUST00000146703 Arid1b-003 5040578-5127640 retained_intron
  ENSMUST00000156775 Arid1b-004 4996429-5098186 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000092723ENSMUST00000115797ENSMUST00000115799
Transcript ID C166 Tie2+ EC mES
ENSMUST00000092723 7.197±1.00 3.184±1.00 6.307±1.75
ENSMUST00000115797 N/A N/A 1.020±0.00
ENSMUST00000115799 N/A 1.304±0.57 1.934±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00055G CIL_00055G_0002 CGP
CIL_00055F CIL_00055F_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006338 IC chromatin remodeling
GO:0016514 IEA SWI/SNF complex
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092503 arid1b protein_coding Danio_rerio
ENSG00000049618 ARID1B AT rich interactive domain 1B (SWI1-like) protein_coding Homo_sapiens

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