ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070643 Sox13 10090 - 1:133382303-133424377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094551 Sox13-201 133383651-133393270 protein_coding
  ENSMUST00000126530 Sox13-003 133384537-133386434 retained_intron
  ENSMUST00000144386 Sox13-001 133382303-133393218 protein_coding
  ENSMUST00000145922 Sox13-004 133383978-133385526 retained_intron
  ENSMUST00000153799 Sox13-002 133382303-133424377 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000094551ENSMUST00000126530ENSMUST00000144386ENSMUST00000145922ENSMUST00000153799
Transcript ID C166 Tie2+ EC mES
ENSMUST00000094551 0.048±0.00 4.916±0.00 N/A
ENSMUST00000126530 0.086±0.00 N/A N/A
ENSMUST00000144386 0.095±0.09 4.468±3.17 2.033±0.55
ENSMUST00000145922 0.123±0.02 N/A N/A
ENSMUST00000153799 0.041±0.02 3.369±0.00 2.629±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008W2 CIL_0008W2_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045586 IDA regulation of gamma-delta T cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030297 sox13 protein_coding Danio_rerio
ENSG00000143842 SOX13 SRY (sex determining region Y)-box 13 protein_coding Homo_sapiens

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