ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079658 Tceb1 10090 - 1:16641725-16657042 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115352 Tceb1-001 16642767-16657042 protein_coding
  ENSMUST00000185393 Tceb1-009 16643342-16648039 protein_coding
  ENSMUST00000185771 Tceb1-006 16643191-16656914 protein_coding
  ENSMUST00000186541 Tceb1-010 16646955-16656915 retained_intron
  ENSMUST00000186701 Tceb1-007 16643472-16656625 protein_coding
  ENSMUST00000186948 Tceb1-004 16643142-16657018 protein_coding
  ENSMUST00000187910 Tceb1-005 16643169-16657038 protein_coding
  ENSMUST00000188641 Tceb1-002 16641725-16656884 protein_coding
  ENSMUST00000188987 Tceb1-008 16646836-16656900 retained_intron
  ENSMUST00000190986 Tceb1-011 16647681-16656878 retained_intron
  ENSMUST00000191535 Tceb1-003 16647736-16657042 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000115352ENSMUST00000185393ENSMUST00000186948ENSMUST00000188641
Transcript ID C166 Tie2+ EC mES
ENSMUST00000115352 28.686±1.53 21.155±2.03 9.602±1.99
ENSMUST00000185393 202.715±17.02 22.195±12.18 N/A
ENSMUST00000186948 N/A 7.443±0.85 N/A
ENSMUST00000188641 12.610±0.83 6.751±3.33 8.082±0.62

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005C4 CIL_0005C4_0003 CGP
CIL_00008W CIL_00008W_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0030891 IEA VCB complex
GO:0032403 IEA protein complex binding
GO:0032968 IEA positive regulation of transcription elongation from RNA polymerase II promoter
GO:0070449 IDA elongin complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045359 tceb1b protein_coding Danio_rerio
ENSG00000154582 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) protein_coding Homo_sapiens

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