ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154582 TCEB1 9606 - 8:73939169-73972287 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284811 TCEB1-007 73946401-73972106 protein_coding
  ENST00000518127 TCEB1-004 73945119-73972287 protein_coding
  ENST00000519082 TCEB1-009 73946700-73972252 protein_coding
  ENST00000519487 TCEB1-006 73946264-73970637 protein_coding
  ENST00000520210 TCEB1-003 73945608-73972170 protein_coding
  ENST00000520242 TCEB1-001 73945617-73972247 protein_coding
  ENST00000522337 TCEB1-010 73946473-73972232 protein_coding
  ENST00000523815 TCEB1-008 73946534-73971908 protein_coding
  ENST00000602840 TCEB1-005 73939169-73972186 protein_coding
  ENST00000622804 TCEB1-201 73945138-73971908 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000284811ENST00000518127ENST00000519082ENST00000519487ENST00000520242ENST00000523815
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000284811 71.451±10.80 61.609±14.47 13.256±0.00 25.901±0.00 28.079±19.69
ENST00000518127 N/A 3.659±1.02 N/A N/A 4.222±2.31
ENST00000519082 N/A N/A N/A N/A 19.075±6.23
ENST00000519487 N/A 4.318±0.00 N/A 13.192±0.00 8.736±3.85
ENST00000520242 10.520±2.43 6.022±1.16 5.150±0.00 9.173±0.00 14.384±9.01
ENST00000523815 41.254±3.54 16.532±6.68 N/A 13.255±0.00 16.190±7.13

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005C4 CIL_0005C4_0002 CGP
CIL_00008W CIL_00008W_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0030891 IEA VCB complex
GO:0032403 IEA protein complex binding
GO:0032968 IEA positive regulation of transcription elongation from RNA polymerase II promoter
GO:0050434 TAS positive regulation of viral transcription
GO:0061418 TAS regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0070449 IEA elongin complex
GO:0071456 TAS cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045359 tceb1b protein_coding Danio_rerio
ENSMUSG00000079658 Tceb1 protein_coding Mus_musculus

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