ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002305 Kdm7a-001 ENSMUSG00000042599 10090 - 6:39136623-39206789 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000002305
Transcript ID C166 Tie2+ EC mES
ENSMUST00000002305 3.045±0.73 3.350±1.30 2.560±1.66

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 ISS iron ion binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 ISS zinc ion binding
GO:0016706 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030901 ISS midbrain development
GO:0032454 IMP histone demethylase activity (H3-K9 specific)
GO:0033169 IMP histone H3-K9 demethylation
GO:0035064 ISS methylated histone binding
GO:0035574 ISS histone H4-K20 demethylation
GO:0035575 ISS histone demethylase activity (H4-K20 specific)
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0051864 ISS histone demethylase activity (H3-K36 specific)
GO:0055114 IEA oxidation-reduction process
GO:0070544 ISS histone H3-K36 demethylation
GO:0071557 IMP histone H3-K27 demethylation
GO:0071558 IMP histone demethylase activity (H3-K27 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050379 kdm7ab-001 protein_coding Danio_rerio 0 569
ENST00000359246 PHF2-001 protein_coding Homo_sapiens 5e-33 148
ENST00000375376 PHF2-201 protein_coding Homo_sapiens 2e-33 148
ENST00000397560 KDM7A-001 protein_coding Homo_sapiens 0 5315
ENST00000472616 KDM7A-002 nonsense_mediated_decay Homo_sapiens 0 1903
ENST00000478996 KDM7A-003 retained_intron Homo_sapiens 0 621
ENST00000610682 PHF2-202 protein_coding Homo_sapiens 2e-33 148

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