ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020268 Ccar1-201 ENSMUSG00000020074 10090 - 10:62743928-62792368 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000020268
Transcript ID C166 Tie2+ EC mES
ENSMUST00000020268 18.939±3.02 12.911±3.69 11.434±3.53

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0007049 IEA cell cycle
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109579 ccar1-201 protein_coding Danio_rerio 0 654
ENSDART00000111129 ccar1-202 protein_coding Danio_rerio 0 654
ENSDART00000133057 ccar1-001 protein_coding Danio_rerio 0 654
ENSDART00000140406 ccar1-004 processed_transcript Danio_rerio 0 230
ENST00000265872 CCAR1-001 protein_coding Homo_sapiens 0 4975
ENST00000398676 CCAR1-019 retained_intron Homo_sapiens 0 333
ENST00000479143 CCAR1-006 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000480627 CCAR1-004 retained_intron Homo_sapiens 0 575
ENST00000483264 CCAR1-005 processed_transcript Homo_sapiens 0 658
ENST00000494903 CCAR1-018 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000536012 CCAR1-014 protein_coding Homo_sapiens 0 3129
ENST00000536391 CCAR1-017 protein_coding Homo_sapiens 0 468
ENST00000538031 CCAR1-003 protein_coding Homo_sapiens 0 701
ENST00000539250 CCAR1-020 retained_intron Homo_sapiens 0 647
ENST00000539539 CCAR1-012 protein_coding Homo_sapiens 0 3960
ENST00000540210 CCAR1-015 nonsense_mediated_decay Homo_sapiens 0 2235
ENST00000541012 CCAR1-010 nonsense_mediated_decay Homo_sapiens 0 2270
ENST00000543225 CCAR1-013 protein_coding Homo_sapiens 0 2922
ENST00000543229 CCAR1-011 nonsense_mediated_decay Homo_sapiens 0 3016
ENST00000543706 CCAR1-021 protein_coding Homo_sapiens 0 612
ENST00000543719 CCAR1-009 protein_coding Homo_sapiens 0 4268

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