ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022638 Nefm-001 ENSMUSG00000022054 10090 - 14:68119283-68124846 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000022638
Transcript ID Tie2+ EC mES
ENSMUST00000022638 0.155±0.10 0.093±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IGI microtubule cytoskeleton organization
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005883 IDA neurofilament
GO:0008088 IMP axon cargo transport
GO:0030424 IDA axon
GO:0031133 IMP regulation of axon diameter
GO:0031594 IDA neuromuscular junction
GO:0043005 IDA neuron projection
GO:0045104 IMP intermediate filament cytoskeleton organization
GO:0045110 IGI intermediate filament bundle assembly
GO:0060052 IGI neurofilament cytoskeleton organization
GO:0097418 IEA neurofibrillary tangle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000080256 nefma-001 protein_coding Danio_rerio 0 448
ENST00000221166 NEFM-001 protein_coding Homo_sapiens 0 2278
ENST00000257860 PRPH-001 protein_coding Homo_sapiens 0.000000000000006 88
ENST00000433454 NEFM-002 protein_coding Homo_sapiens 0 1242
ENST00000437366 NEFM-201 protein_coding Homo_sapiens 0 2272
ENST00000518131 NEFM-003 protein_coding Homo_sapiens 0 2242
ENST00000521540 NEFM-004 processed_transcript Homo_sapiens 0 2095
ENST00000523467 NEFM-006 processed_transcript Homo_sapiens 0 828
ENST00000530631 PRPH-003 retained_intron Homo_sapiens 0.000000000000002 88
ENST00000532332 PRPH-004 protein_coding Homo_sapiens 0.000000000000001 88

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