ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023116 Aco2-001 ENSMUSG00000022477 10090 + 15:81872309-81915133 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000023116
Transcript ID C166 Tie2+ EC mES
ENSMUST00000023116 148.818±13.19 46.232±29.47 26.971±6.34

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003994 IDA aconitate hydratase activity
GO:0005506 IEA iron ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0006101 IEA citrate metabolic process
GO:0006102 IEA isocitrate metabolic process
GO:0051538 IEA 3 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216254 ACO2-001 protein_coding Homo_sapiens 0 3097
ENST00000337566 POLR3H-007 protein_coding Homo_sapiens 5e-27 126
ENST00000355209 POLR3H-001 protein_coding Homo_sapiens 0 241
ENST00000396504 POLR3H-201 protein_coding Homo_sapiens 0 241
ENST00000396512 ACO2-002 protein_coding Homo_sapiens 0 1971
ENST00000431534 POLR3H-004 nonsense_mediated_decay Homo_sapiens 5e-27 126
ENST00000446607 RP4-764D2.1-001 processed_pseudogene Homo_sapiens 0 2289
ENST00000457251 RP1-101G11.2-001 processed_pseudogene Homo_sapiens 0 1700
ENST00000466237 ACO2-007 processed_transcript Homo_sapiens 0 588
ENST00000471094 ACO2-003 processed_transcript Homo_sapiens 0 433
ENST00000478010 ACO2-005 retained_intron Homo_sapiens 0 617
ENST00000481310 ACO2-006 processed_transcript Homo_sapiens 0 239
ENST00000482208 ACO2-004 retained_intron Homo_sapiens 0 381
ENST00000506543 RP11-524L6.2-001 processed_pseudogene Homo_sapiens 0 1005

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