ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027288 Cnga3-001 ENSMUSG00000026114 10090 + 1:37219205-37263384 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027288
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027288 0.006±0.00 0.057±0.05 0.019±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005221 IPI intracellular cyclic nucleotide activated cation channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0007601 IEA visual perception
GO:0007603 IBA phototransduction, visible light
GO:0008022 IEA protein C-terminus binding
GO:0030425 IEA dendrite
GO:0030553 IBA cGMP binding
GO:0031960 IEA response to corticosteroid
GO:0032026 IEA response to magnesium ion
GO:0034220 IEA ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0042622 IEA photoreceptor outer segment membrane
GO:0043025 IEA neuronal cell body
GO:0043204 IEA perikaryon
GO:0046549 IMP retinal cone cell development
GO:0051591 IEA response to cAMP
GO:0071805 IBA potassium ion transmembrane transport
GO:1902495 IEA transmembrane transporter complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272602 CNGA3-001 protein_coding Homo_sapiens 0 1749
ENST00000329903 CNGA2-001 protein_coding Homo_sapiens 0 580
ENST00000393504 CNGA3-201 protein_coding Homo_sapiens 0 1749
ENST00000409937 CNGA3-003 protein_coding Homo_sapiens 0 1749
ENST00000414432 USP32P2-002 retained_intron Homo_sapiens 0.00002 57
ENST00000436404 CNGA3-002 protein_coding Homo_sapiens 0 1786
ENST00000444558 USP32P1-006 processed_transcript Homo_sapiens 0.00002 57
ENST00000522166 CHCHD7-003 retained_intron Homo_sapiens 0.000001 60

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