ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028386 Nckap1-001 ENSMUSG00000027002 10090 - 2:80500512-80581264 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028386
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028386 101.749±4.12 44.311±20.07 42.051±3.74

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001756 IMP somitogenesis
GO:0001843 IMP neural tube closure
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007354 IMP zygotic determination of anterior/posterior axis, embryo
GO:0007492 IMP endoderm development
GO:0008078 IMP mesodermal cell migration
GO:0010172 IMP embryonic body morphogenesis
GO:0016021 IEA integral component of membrane
GO:0030027 IDA lamellipodium
GO:0030032 IDA lamellipodium assembly
GO:0030903 IMP notochord development
GO:0030950 IMP establishment or maintenance of actin cytoskeleton polarity
GO:0032880 IMP regulation of protein localization
GO:0035050 IMP embryonic heart tube development
GO:0042074 IMP cell migration involved in gastrulation
GO:0045175 IDA basal protein localization
GO:0045176 IDA apical protein localization
GO:0048339 IMP paraxial mesoderm development
GO:0048340 IMP paraxial mesoderm morphogenesis
GO:0048570 IMP notochord morphogenesis
GO:0048617 IMP embryonic foregut morphogenesis
GO:0050821 IMP protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360982 NCKAP1-002 protein_coding Homo_sapiens 0 5173
ENST00000361354 NCKAP1-001 protein_coding Homo_sapiens 0 5256
ENST00000448218 RP13-75G22.1-001 processed_pseudogene Homo_sapiens 0 1203
ENST00000471640 NCKAP1-005 processed_transcript Homo_sapiens 0 248
ENST00000477988 NCKAP1-003 retained_intron Homo_sapiens 0 344
ENST00000478449 NCKAP1-006 processed_transcript Homo_sapiens 0 760
ENST00000495619 NCKAP1-008 retained_intron Homo_sapiens 0 436

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