ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031388 Vps33a-001 ENSMUSG00000029434 10090 - 5:123528659-123573038 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031388
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031388 8.378±0.92 6.992±1.68 4.995±0.60

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 ISA vesicle-mediated transport
GO:0030220 IMP platelet formation
GO:0043473 IMP pigmentation
GO:0048070 IMP regulation of developmental pigmentation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267199 VPS33A-001 protein_coding Homo_sapiens 0 2017
ENST00000451053 VPS33A-002 protein_coding Homo_sapiens 0 558
ENST00000535844 RP11-512M8.5-001 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000542310 VPS33A-004 processed_transcript Homo_sapiens 0 475
ENST00000542790 VPS33A-006 retained_intron Homo_sapiens 0 350
ENST00000543633 VPS33A-003 nonsense_mediated_decay Homo_sapiens 0 1873
ENST00000544349 VPS33A-005 retained_intron Homo_sapiens 0 730

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