ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031513 Srsf9-001 ENSMUSG00000029538 10090 + 5:115327177-115333080 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031513
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031513 66.552±9.31 26.411±11.40 90.996±3.77

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0048025 ISS negative regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229390 SRSF9-001 protein_coding Homo_sapiens 0 1107
ENST00000399149 SRSF9P1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000546942 SRSF9-002 retained_intron Homo_sapiens 0 595
ENST00000548326 SRSF9-004 retained_intron Homo_sapiens 0 274
ENST00000548792 SRSF9-003 retained_intron Homo_sapiens 0 516
ENST00000550458 SRSF9-005 protein_coding Homo_sapiens 0 283
ENST00000551765 GATC-001 protein_coding Homo_sapiens 0 274
ENST00000560043 RP11-752G15.4-001 processed_pseudogene Homo_sapiens 0 704
ENST00000603963 SRSF9-006 nonsense_mediated_decay Homo_sapiens 0 569

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