ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034053 Pdlim3-201 ENSMUSG00000031636 10090 + 8:45885485-45919546 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034053
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034053 0.536±0.29 0.287±0.10 6.391±6.62

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0007015 IDA actin filament organization
GO:0007507 IMP heart development
GO:0008092 IPI cytoskeletal protein binding
GO:0008270 IEA zinc ion binding
GO:0008307 IDA structural constituent of muscle
GO:0015629 IPI actin cytoskeleton
GO:0030018 TAS Z disc

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284767 PDLIM3-201 protein_coding Homo_sapiens 0 416
ENST00000284770 PDLIM3-001 protein_coding Homo_sapiens 0 416
ENST00000284771 PDLIM3-002 protein_coding Homo_sapiens 0 1131
ENST00000504011 PDLIM3-003 retained_intron Homo_sapiens 0 682
ENST00000504355 PDLIM3-008 retained_intron Homo_sapiens 0 324
ENST00000505886 PDLIM3-006 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000512380 PDLIM3-010 retained_intron Homo_sapiens 0 484
ENST00000514142 PDLIM3-004 retained_intron Homo_sapiens 0 278
ENST00000515261 PDLIM3-007 retained_intron Homo_sapiens 0 414

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