ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034090 Sall1-201 ENSMUSG00000031665 10090 - 8:89027248-89044162 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECENSMUST00000034090
Transcript ID Tie2+ EC
ENSMUST00000034090 0.109±0.06

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000792 IDA heterochromatin
GO:0001657 IMP ureteric bud development
GO:0001822 IEA kidney development
GO:0001843 IGI neural tube closure
GO:0003281 IGI ventricular septum development
GO:0003337 IEA mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007507 IEA heart development
GO:0008013 IEA beta-catenin binding
GO:0008406 IEA gonad development
GO:0010369 IEA chromocenter
GO:0016581 IDA NuRD complex
GO:0021553 IMP olfactory nerve development
GO:0021772 IMP olfactory bulb development
GO:0021915 IGI neural tube development
GO:0021983 IEA pituitary gland development
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0030325 IEA adrenal gland development
GO:0031129 IMP inductive cell-cell signaling
GO:0035136 IGI forelimb morphogenesis
GO:0035137 IGI hindlimb morphogenesis
GO:0042473 IEA outer ear morphogenesis
GO:0042733 IEA embryonic digit morphogenesis
GO:0045666 IMP positive regulation of neuron differentiation
GO:0045879 IGI negative regulation of smoothened signaling pathway
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048566 IEA embryonic digestive tract development
GO:0060173 IEA limb development
GO:0061034 IEA olfactory bulb mitral cell layer development
GO:0072092 IMP ureteric bud invasion
GO:2000177 IMP regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000065331 sall4-201 protein_coding Danio_rerio 1e-38 167
ENST00000251020 SALL1-001 protein_coding Homo_sapiens 0 5210
ENST00000292530 ZNF333-001 protein_coding Homo_sapiens 0.0000005 62
ENST00000438101 SALL1P1-001 processed_pseudogene Homo_sapiens 0 3118
ENST00000440970 SALL1-201 protein_coding Homo_sapiens 0 5040
ENST00000536229 SALL3-006 protein_coding Homo_sapiens 0 291
ENST00000537592 SALL3-001 protein_coding Homo_sapiens 0 291
ENST00000562674 SALL1-005 processed_transcript Homo_sapiens 4.99983e-42 174
ENST00000566102 SALL1-002 protein_coding Homo_sapiens 0 562
ENST00000570206 SALL1-003 protein_coding Homo_sapiens 0 4268
ENST00000572106 SALL3-002 protein_coding Homo_sapiens 0 285
ENST00000575389 SALL3-002 protein_coding Homo_sapiens 0 291
ENST00000576809 SALL3-001 protein_coding Homo_sapiens 0 285
ENST00000598161 ZNF333-007 nonsense_mediated_decay Homo_sapiens 0.0000005 62
ENST00000612458 SALL3-203 protein_coding Homo_sapiens 0 291
ENST00000614625 SALL3-202 protein_coding Homo_sapiens 0 285
ENST00000614883 SALL3-204 protein_coding Homo_sapiens 0 291
ENST00000616649 SALL3-201 protein_coding Homo_sapiens 0 291

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