ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034623 Trappc4-201 ENSMUSG00000032112 10090 - 9:44403761-44407548 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000034623
Transcript ID C166 Tie2+ EC mES
ENSMUST00000034623 37.054±9.91 26.690±11.79 13.052±1.80

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005795 IDA Golgi stack
GO:0005801 IEA cis-Golgi network
GO:0005886 TAS plasma membrane
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008021 IDA synaptic vesicle
GO:0016192 TAS vesicle-mediated transport
GO:0016358 IDA dendrite development
GO:0030008 IDA TRAPP complex
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0045212 TAS neurotransmitter receptor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359005 TRAPPC4-005 protein_coding Homo_sapiens 0 599
ENST00000434101 TRAPPC4-002 protein_coding Homo_sapiens 0 405
ENST00000447216 TRAPPC4-003 retained_intron Homo_sapiens 0 601
ENST00000524797 TRAPPC4-013 retained_intron Homo_sapiens 0 342
ENST00000525079 TRAPPC4-011 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000525303 TRAPPC4-010 protein_coding Homo_sapiens 0 340
ENST00000526141 TRAPPC4-014 processed_transcript Homo_sapiens 2.94273e-44 182
ENST00000527680 TRAPPC4-008 retained_intron Homo_sapiens 0 470
ENST00000528230 TRAPPC4-009 protein_coding Homo_sapiens 0 453
ENST00000531290 TRAPPC4-007 retained_intron Homo_sapiens 0 721
ENST00000533012 TRAPPC4-006 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000533058 TRAPPC4-004 protein_coding Homo_sapiens 0 797
ENST00000533149 TRAPPC4-012 retained_intron Homo_sapiens 0 468
ENST00000533632 TRAPPC4-001 protein_coding Homo_sapiens 0 935

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