ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035648 Atg12-201 ENSMUSG00000032905 10090 - 18:46732417-46741579 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000035648
Transcript ID C166 Tie2+ EC mES
ENSMUST00000035648 30.268±1.11 17.643±12.46 16.310±2.47

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000422 IBA mitochondrion degradation
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006501 IBA C-terminal protein lipidation
GO:0006914 TAS autophagy
GO:0006995 IBA cellular response to nitrogen starvation
GO:0016020 IEA membrane
GO:0019776 IBA Atg8 ligase activity
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0034274 IBA Atg12-Atg5-Atg16 complex
GO:0043234 IEA protein complex
GO:0044804 IBA nucleophagy
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379594 ATG12-007 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000500945 ATG12-003 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000505252 ATG12-005 retained_intron Homo_sapiens 1.4013e-45 189
ENST00000505993 ATG12-009 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000507793 ATG12-013 retained_intron Homo_sapiens 0 189
ENST00000508464 ATG12-012 retained_intron Homo_sapiens 0 189
ENST00000509598 ATG12-004 processed_transcript Homo_sapiens 0 368
ENST00000509910 ATG12-001 protein_coding Homo_sapiens 0 473
ENST00000511984 ATG12-011 retained_intron Homo_sapiens 0 368
ENST00000513167 ATG12-008 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000513292 ATG12-014 processed_transcript Homo_sapiens 0 189
ENST00000513322 ATG12-002 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000578331 RP11-766H1.1-001 processed_pseudogene Homo_sapiens 0 438

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