ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039562 Trim13-201 ENSMUSG00000035235 10090 + 14:61599512-61605946 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000039562
Transcript ID C166 Tie2+ EC mES
ENSMUST00000039562 2.431±0.20 5.509±4.50 1.521±1.03

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005789 ISS endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0010332 ISS response to gamma radiation
GO:0016021 IEA integral component of membrane
GO:0016239 ISS positive regulation of macroautophagy
GO:0016874 IEA ligase activity
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865 ISS protein autoubiquitination
GO:0097038 ISS perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356017 TRIM13-006 protein_coding Homo_sapiens 0 1358
ENST00000378182 TRIM13-005 protein_coding Homo_sapiens 0 1380
ENST00000378183 TRIM13-004 protein_coding Homo_sapiens 0 1005
ENST00000420995 TRIM13-001 protein_coding Homo_sapiens 0 1380
ENST00000442421 TRIM13-002 protein_coding Homo_sapiens 0 492
ENST00000457662 TRIM13-003 protein_coding Homo_sapiens 0 1363
ENST00000571108 RP11-417N10.3-001 unprocessed_pseudogene Homo_sapiens 0 200

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