ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040964 Ss18-202 ENSMUSG00000037013 10090 - 18:14624198-14682766 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; mESENSMUST00000040964
Transcript ID mES
ENSMUST00000040964 1.455±0.08

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IDA microtubule cytoskeleton organization
GO:0000902 IDA cell morphogenesis
GO:0005881 IDA cytoplasmic microtubule
GO:0007010 IDA cytoskeleton organization
GO:0035556 IDA intracellular signal transduction
GO:0042493 IDA response to drug
GO:0048013 IDA ephrin receptor signaling pathway
GO:0071564 IDA npBAF complex
GO:0097150 IMP neuronal stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269137 SS18-001 protein_coding Homo_sapiens 0 641
ENST00000269138 SS18-007 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000415083 SS18-003 protein_coding Homo_sapiens 0 1489
ENST00000539244 SS18-006 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000542420 SS18-002 protein_coding Homo_sapiens 0 1489
ENST00000577572 SS18-011 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000577636 SS18-026 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000577751 SS18-008 processed_transcript Homo_sapiens 0 217
ENST00000578595 SS18-021 processed_transcript Homo_sapiens 5e-17 92
ENST00000578700 SS18-010 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000578954 SS18-014 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000579061 SS18-024 protein_coding Homo_sapiens 0 451
ENST00000579640 SS18-004 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000580642 SS18-019 nonsense_mediated_decay Homo_sapiens 2.8026e-45 185
ENST00000580751 SS18-018 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000580958 SS18-013 retained_intron Homo_sapiens 0 390
ENST00000581021 SS18-022 protein_coding Homo_sapiens 0 281
ENST00000581570 SS18-016 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000582448 SS18-009 nonsense_mediated_decay Homo_sapiens 3e-16 90
ENST00000582792 SS18-017 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000584083 SS18-023 protein_coding Homo_sapiens 0 449
ENST00000585121 SS18-005 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000585241 SS18-025 processed_transcript Homo_sapiens 0 313

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