ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048518 Parpbp-001 ENSMUSG00000035365 10090 - 10:88091432-88146941 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000048518
Transcript ID C166 Tie2+ EC mES
ENSMUST00000048518 2.566±0.66 1.399±0.00 1.703±0.73

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:2000042 ISS negative regulation of double-strand break repair via homologous recombination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327680 PARPBP-001 protein_coding Homo_sapiens 0 1129
ENST00000329406 PMCH-001 protein_coding Homo_sapiens 0 265
ENST00000392909 PARPBP-012 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000392911 PARPBP-006 protein_coding Homo_sapiens 0 1096
ENST00000392914 PARPBP-013 retained_intron Homo_sapiens 0 344
ENST00000412715 PARPBP-010 protein_coding Homo_sapiens 0 551
ENST00000415808 PMCHL2-004 processed_transcript Homo_sapiens 9.80909e-45 185
ENST00000417507 PARPBP-009 protein_coding Homo_sapiens 0 551
ENST00000418902 PMCHL1-001 processed_transcript Homo_sapiens 9.80909e-45 185
ENST00000423102 PMCHL1-004 transcribed_unprocessed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000423301 PMCHL1-002 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000430902 PMCHL1-003 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000450213 PMCHL2-002 processed_transcript Homo_sapiens 9.80909e-45 185
ENST00000457614 PARPBP-003 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000457791 PMCHL2-001 transcribed_unprocessed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000535811 PARPBP-011 processed_transcript Homo_sapiens 0 342
ENST00000537257 PARPBP-007 protein_coding Homo_sapiens 0 344
ENST00000541394 PARPBP-002 protein_coding Homo_sapiens 0 800
ENST00000541668 PARPBP-004 processed_transcript Homo_sapiens 0 381
ENST00000543784 PARPBP-008 protein_coding Homo_sapiens 0 300
ENST00000610574 AC145141.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 1.4013e-45 185
ENST00000618044 AC145141.1-004 processed_transcript Homo_sapiens 9.80909e-45 185
ENST00000619209 AC145141.1-002 processed_transcript Homo_sapiens 9.80909e-45 185

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