ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049501 Ofd1-001 ENSMUSG00000040586 10090 - X:166390033-166440704 protein_coding

Mus musculus Ensembl GRCm38

Genome
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000049501
Transcript ID C166 Tie2+ EC mES
ENSMUST00000049501 1.899±0.54 2.716±2.24 2.541±1.14

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005929 IDA cilium
GO:0010172 IMP embryonic body morphogenesis
GO:0015630 IEA microtubule cytoskeleton
GO:0016020 IEA membrane
GO:0034451 IDA centriolar satellite
GO:0035082 IMP axoneme assembly
GO:0036064 IDA ciliary basal body
GO:0043014 IDA alpha-tubulin binding
GO:0043015 IDA gamma-tubulin binding
GO:0060271 IMP cilium morphogenesis
GO:0060287 IMP epithelial cilium movement involved in determination of left/right asymmetry
GO:2000314 IMP negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340096 OFD1-001 protein_coding Homo_sapiens 0 1679
ENST00000380550 OFD1-201 protein_coding Homo_sapiens 0 898
ENST00000380567 OFD1-002 protein_coding Homo_sapiens 0 499
ENST00000398395 OFD1-202 protein_coding Homo_sapiens 0 499
ENST00000437639 OFD1P17-001 processed_pseudogene Homo_sapiens 0 1615
ENST00000485052 OFD1-006 processed_transcript Homo_sapiens 4e-30 135
ENST00000490265 OFD1-003 processed_transcript Homo_sapiens 0 979

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