ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055296 Polr1a-201 ENSMUSG00000049553 10090 + 6:71909053-71979356 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000055296
Transcript ID C166 Tie2+ EC mES
ENSMUST00000055296 16.212±1.35 4.509±3.23 11.694±1.69

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IEA nucleolus
GO:0005736 IDA DNA-directed RNA polymerase I complex
GO:0005737 IEA cytoplasm
GO:0006360 IBA transcription from RNA polymerase I promoter
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263857 POLR1A-001 protein_coding Homo_sapiens 0 5262
ENST00000409681 POLR1A-002 protein_coding Homo_sapiens 0 4615
ENST00000462078 POLR1A-008 processed_transcript Homo_sapiens 0 198
ENST00000486964 POLR1A-003 retained_intron Homo_sapiens 0 1022
ENST00000492034 POLR1A-009 processed_transcript Homo_sapiens 0 466
ENST00000496892 POLR1A-010 processed_transcript Homo_sapiens 0 248

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