ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057054 Meox1-001 ENSMUSG00000001493 10090 - 11:101877510-101894374 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000057054
Transcript ID C166 Tie2+ EC mES
ENSMUST00000057054 0.065±0.02 23.711±14.03 0.113±0.09

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001757 IGI somite specification
GO:0003682 IDA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0043565 IMP sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060218 ISS hematopoietic stem cell differentiation
GO:0061053 IMP somite development
GO:0061056 IMP sclerotome development
GO:0071837 IPI HMG box domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239144 HOXB8-001 protein_coding Homo_sapiens 0.00000000009 73
ENST00000306324 HOXD4-001 protein_coding Homo_sapiens 0.000000003 68
ENST00000318579 MEOX1-001 protein_coding Homo_sapiens 0 780
ENST00000329168 MEOX1-201 protein_coding Homo_sapiens 0 377
ENST00000393661 MEOX1-003 protein_coding Homo_sapiens 0 593
ENST00000468418 HOXD3-001 nonsense_mediated_decay Homo_sapiens 0.000000008 68
ENST00000498634 HOXB8-003 protein_coding Homo_sapiens 0.00000000002 73
ENST00000549132 MEOX1-002 protein_coding Homo_sapiens 0 377
ENST00000576562 HOXB8-002 protein_coding Homo_sapiens 0.00000000004 73

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