ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067689 Tnrc6b-201 ENSMUSG00000047888 10090 + 15:80711319-80941086 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000067689
Transcript ID C166 Tie2+ EC mES
ENSMUST00000067689 2.380±1.33 4.022±3.20 3.051±0.44

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006417 IEA regulation of translation
GO:0031047 IEA gene silencing by RNA
GO:0044822 IEA poly(A) RNA binding
GO:0060213 IEA positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:1900153 IEA positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000153428 tnrc6b-001 protein_coding Danio_rerio 1e-22 115
ENST00000301624 TNRC6C-201 protein_coding Homo_sapiens 2e-28 134
ENST00000301923 TNRC6B-201 protein_coding Homo_sapiens 0 4968
ENST00000335727 TNRC6B-002 protein_coding Homo_sapiens 0 4735
ENST00000335749 TNRC6C-202 protein_coding Homo_sapiens 2e-28 134
ENST00000402203 TNRC6B-001 protein_coding Homo_sapiens 0 3923
ENST00000441751 TNRC6B-004 protein_coding Homo_sapiens 0 385
ENST00000446273 TNRC6B-003 protein_coding Homo_sapiens 0 6270
ENST00000454349 TNRC6B-202 protein_coding Homo_sapiens 0 5304
ENST00000467658 TNRC6B-007 retained_intron Homo_sapiens 0 344
ENST00000497559 TNRC6B-006 processed_transcript Homo_sapiens 0 628
ENST00000588061 TNRC6C-002 protein_coding Homo_sapiens 2e-28 134
ENST00000588847 TNRC6C-001 protein_coding Homo_sapiens 2e-28 134

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