ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070395 Aarsd1-003 ENSMUSG00000075528 10090 - 11:101406839-101417615 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000070395
Transcript ID C166 Tie2+ EC mES
ENSMUST00000070395 8.745±1.03 9.787±5.31 21.569±4.88

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002161 IDA aminoacyl-tRNA editing activity
GO:0002196 IDA Ser-tRNA(Ala) hydrolase activity
GO:0003676 IEA nucleic acid binding
GO:0004813 IEA alanine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006419 IEA alanyl-tRNA aminoacylation
GO:0006450 IDA regulation of translational fidelity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360221 PTGES3L-AARSD1-004 protein_coding Homo_sapiens 0 1421
ENST00000409103 PTGES3L-AARSD1-005 protein_coding Homo_sapiens 0 1421
ENST00000409399 PTGES3L-AARSD1-002 protein_coding Homo_sapiens 0 1421
ENST00000413508 RP13-33H18.1-001 processed_pseudogene Homo_sapiens 0 950
ENST00000416949 AARSD1-015 processed_transcript Homo_sapiens 0 390
ENST00000421990 PTGES3L-AARSD1-001 protein_coding Homo_sapiens 0 1421
ENST00000423601 PTGES3L-AARSD1-006 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000427569 AARSD1-001 protein_coding Homo_sapiens 0 1452
ENST00000430739 AARSD1-013 protein_coding Homo_sapiens 0 824
ENST00000436545 AARSD1-017 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000441280 AARSD1-002 retained_intron Homo_sapiens 0 758
ENST00000450475 AARSD1-014 nonsense_mediated_decay Homo_sapiens 0 872
ENST00000452752 PTGES3L-AARSD1-007 protein_coding Homo_sapiens 0 261
ENST00000474578 AARSD1-021 retained_intron Homo_sapiens 0 538
ENST00000478040 AARSD1-022 retained_intron Homo_sapiens 0 315
ENST00000486664 AARSD1-023 retained_intron Homo_sapiens 0 446
ENST00000491665 AARSD1-019 retained_intron Homo_sapiens 0 444
ENST00000492036 AARSD1-012 retained_intron Homo_sapiens 0 335
ENST00000587023 AARSD1-033 retained_intron Homo_sapiens 0 292
ENST00000591096 AARSD1-030 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000591910 AARSD1-028 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000592136 AARSD1-029 retained_intron Homo_sapiens 0 292
ENST00000593123 AARSD1-032 retained_intron Homo_sapiens 0 361

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