ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097822 Ubr4-001 ENSMUSG00000066036 10090 + 4:139380659-139489588 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000097822
Transcript ID C166 Tie2+ EC mES
ENSMUST00000097822 6.639±2.43 6.432±1.22 16.751±2.78

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375218 UBR4-005 protein_coding Homo_sapiens 0 1090
ENST00000375224 UBR4-004 protein_coding Homo_sapiens 0 3925
ENST00000375225 UBR4-002 protein_coding Homo_sapiens 0 804
ENST00000375254 UBR4-001 protein_coding Homo_sapiens 0 19570
ENST00000417040 UBR4-007 protein_coding Homo_sapiens 0 4455
ENST00000419533 UBR4-008 retained_intron Homo_sapiens 0 5705
ENST00000425413 UBR4-006 protein_coding Homo_sapiens 0 1879
ENST00000459947 UBR4-003 retained_intron Homo_sapiens 0 593
ENST00000466969 UBR4-012 processed_transcript Homo_sapiens 0 279
ENST00000467272 UBR4-011 processed_transcript Homo_sapiens 0 1026
ENST00000475973 UBR4-013 processed_transcript Homo_sapiens 0 348
ENST00000483922 UBR4-010 retained_intron Homo_sapiens 0 350
ENST00000486515 UBR4-009 processed_transcript Homo_sapiens 0 472
ENST00000492606 UBR4-015 retained_intron Homo_sapiens 0 276
ENST00000494503 UBR4-016 processed_transcript Homo_sapiens 0 610
ENST00000497018 UBR4-017 processed_transcript Homo_sapiens 0.000000000000004 84

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