ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097888 Ago1-001 ENSMUSG00000041530 10090 - 4:126435012-126468583 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000097888
Transcript ID C166 Tie2+ EC mES
ENSMUST00000097888 10.535±2.64 3.432±1.48 2.372±1.05

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0000956 ISS nuclear-transcribed mRNA catabolic process
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISO cytoplasm
GO:0005829 IDA cytosol
GO:0005844 ISS polysome
GO:0006351 IEA transcription, DNA-templated
GO:0010586 IDA miRNA metabolic process
GO:0010628 IMP positive regulation of gene expression
GO:0030529 ISS ribonucleoprotein complex
GO:0035068 ISS micro-ribonucleoprotein complex
GO:0035198 IDA miRNA binding
GO:0035278 ISS negative regulation of translation involved in gene silencing by miRNA
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000156255 ago1-001 protein_coding Danio_rerio 0 1997
ENSDART00000091813 ago3b-001 protein_coding Danio_rerio 0 1328
ENST00000220592 AGO2-001 protein_coding Homo_sapiens 0 1395
ENST00000246314 AGO3-002 protein_coding Homo_sapiens 0 1110
ENST00000373191 AGO3-003 protein_coding Homo_sapiens 0 1194
ENST00000373204 AGO1-002 protein_coding Homo_sapiens 0 6167
ENST00000373206 AGO1-001 protein_coding Homo_sapiens 0 5040
ENST00000519980 AGO2-002 protein_coding Homo_sapiens 0 1068
ENST00000520412 AGO2-008 retained_intron Homo_sapiens 0 436
ENST00000523609 AGO2-003 nonsense_mediated_decay Homo_sapiens 0 1349

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