ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102776 Rnf130-001 ENSMUSG00000020376 10090 + 11:50025348-50104753 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000102776
Transcript ID C166 Tie2+ EC mES
ENSMUST00000102776 0.092±0.04 36.419±3.79 10.227±2.69

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0012501 IMP programmed cell death
GO:0016021 NAS integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261947 RNF130-003 protein_coding Homo_sapiens 0 1701
ENST00000519708 RNF130-007 retained_intron Homo_sapiens 0 377
ENST00000520564 RNF130-005 processed_transcript Homo_sapiens 0 309
ENST00000520911 RNF130-002 nonsense_mediated_decay Homo_sapiens 0 1428
ENST00000521389 RNF130-001 protein_coding Homo_sapiens 0 2172
ENST00000521901 RNF130-006 retained_intron Homo_sapiens 0 481
ENST00000522208 RNF130-004 protein_coding Homo_sapiens 0 1677

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