ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103220 Snrnp200-001 ENSMUSG00000003660 10090 + 2:127208399-127240451 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000103220
Transcript ID C166 Tie2+ EC mES
ENSMUST00000103220 35.650±3.52 13.077±1.90 22.824±4.70

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0004004 ISS ATP-dependent RNA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005682 IEA U5 snRNP
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0016020 IEA membrane
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109885 snrnp200-001 protein_coding Danio_rerio 0 4327
ENSDART00000143385 snrnp200-002 processed_transcript Danio_rerio 0 348
ENST00000323853 SNRNP200-001 protein_coding Homo_sapiens 0 8626
ENST00000429650 SNRNP200-006 nonsense_mediated_decay Homo_sapiens 0 2682
ENST00000480242 SNRNP200-004 retained_intron Homo_sapiens 0 721
ENST00000480615 SNRNP200-003 retained_intron Homo_sapiens 0 1736
ENST00000480835 SNRNP200-009 retained_intron Homo_sapiens 0 335
ENST00000484372 SNRNP200-008 retained_intron Homo_sapiens 0 483
ENST00000493271 SNRNP200-007 retained_intron Homo_sapiens 0 318
ENST00000497539 SNRNP200-005 retained_intron Homo_sapiens 0 3133
ENST00000583145 RP13-104F24.3-001 unprocessed_pseudogene Homo_sapiens 0 1110

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